# GitHub repos by nf-core

<https://repo.masters-masters.com/en/owners/nf-core>

[Home](https://repo.masters-masters.com/en) › [nf-core](https://repo.masters-masters.com/en/owners/nf-core)

All 28 public GitHub repos by nf-core in RepoMasters, most starred first: stars, language, tier and card for each.

## GitHub repos by nf-core

28 public repos by nf-core in the catalog, most starred first.

- [nf-core/rnaseq · ★ 1,403 · Nextflow · Beta](https://repo.masters-masters.com/en/repos/nf-core/rnaseq)
- [nf-core/sarek · ★ 616 · Nextflow · Alpha](https://repo.masters-masters.com/en/repos/nf-core/sarek)
- [nf-core/modules · ★ 436 · Nextflow · Alpha](https://repo.masters-masters.com/en/repos/nf-core/modules)
- [nf-core/scrnaseq · ★ 364 · Nextflow · Alpha](https://repo.masters-masters.com/en/repos/nf-core/scrnaseq)
- [nf-core/tools · ★ 330 · Python · Alpha](https://repo.masters-masters.com/en/repos/nf-core/tools)
- [nf-core/mag · ★ 326 · Nextflow · Alpha](https://repo.masters-masters.com/en/repos/nf-core/mag)
- [nf-core/ampliseq · ★ 265 · Nextflow · Alpha](https://repo.masters-masters.com/en/repos/nf-core/ampliseq)
- [nf-core/chipseq · ★ 245 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/chipseq)
- [nf-core/atacseq · ★ 233 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/atacseq)
- [nf-core/nanoseq · ★ 232 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/nanoseq)
- [nf-core/eager · ★ 214 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/eager)
- [nf-core/fetchngs · ★ 202 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/fetchngs)
- [nf-core/methylseq · ★ 201 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/methylseq)
- [nf-core/taxprofiler · ★ 194 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/taxprofiler)
- [nf-core/rnafusion · ★ 176 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/rnafusion)
- [nf-core/viralrecon · ★ 167 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/viralrecon)
- [nf-core/test-datasets · ★ 164 · Prototype](https://repo.masters-masters.com/en/repos/nf-core/test-datasets)
- [nf-core/oncoanalyser · ★ 128 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/oncoanalyser)
- [nf-core/raredisease · ★ 126 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/raredisease)
- [nf-core/funcscan · ★ 119 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/funcscan)
- [nf-core/scdownstream · ★ 118 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/scdownstream)
- [nf-core/cutandrun · ★ 116 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/cutandrun)
- [nf-core/proteinfold · ★ 116 · HTML · Prototype](https://repo.masters-masters.com/en/repos/nf-core/proteinfold)
- [nf-core/configs · ★ 114 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/configs)
- [nf-core/hic · ★ 114 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/hic)
- [nf-core/pangenome · ★ 109 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/pangenome)
- [nf-core/smrnaseq · ★ 103 · Nextflow · Prototype](https://repo.masters-masters.com/en/repos/nf-core/smrnaseq)
- [nf-core/website · ★ 100 · MDX · Prototype](https://repo.masters-masters.com/en/repos/nf-core/website)

## See nf-core on GitHub

- [https://github.com/nf-core](https://github.com/nf-core)

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Data: GitHub