# GitHub repos by scverse

<https://repo.masters-masters.com/en/owners/scverse>

[Home](https://repo.masters-masters.com/en) › [scverse](https://repo.masters-masters.com/en/owners/scverse)

All 19 public GitHub repos by scverse in RepoMasters, most starred first: stars, language, tier and card for each.

## GitHub repos by scverse

19 public repos by scverse in the catalog, most starred first.

- [scverse/scanpy · ★ 2,607 · Python · RC](https://repo.masters-masters.com/en/repos/scverse/scanpy)
- [scverse/scvi-tools · ★ 1,720 · Python · Beta](https://repo.masters-masters.com/en/repos/scverse/scvi-tools)
- [scverse/gget · ★ 1,210 · Python · Beta](https://repo.masters-masters.com/en/repos/scverse/gget)
- [scverse/anndata · ★ 784 · Python · Beta](https://repo.masters-masters.com/en/repos/scverse/anndata)
- [scverse/PyDESeq2 · ★ 768 · Python · Beta](https://repo.masters-masters.com/en/repos/scverse/PyDESeq2)
- [scverse/squidpy · ★ 613 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/squidpy)
- [scverse/cellrank · ★ 460 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/cellrank)
- [scverse/rapids-singlecell · ★ 410 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/rapids-singlecell)
- [scverse/spatialdata · ★ 405 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/spatialdata)
- [scverse/pertpy · ★ 355 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/pertpy)
- [scverse/SnapATAC2 · ★ 329 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/SnapATAC2)
- [scverse/liana · ★ 326 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/liana)
- [scverse/decoupler · ★ 301 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/decoupler)
- [scverse/muon · ★ 279 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/muon)
- [scverse/scirpy · ★ 268 · Python · Alpha](https://repo.masters-masters.com/en/repos/scverse/scirpy)
- [scverse/scanpy-tutorials · ★ 243 · Jupyter Notebook · Prototype](https://repo.masters-masters.com/en/repos/scverse/scanpy-tutorials)
- [scverse/anndataR · ★ 202 · R · Prototype](https://repo.masters-masters.com/en/repos/scverse/anndataR)
- [scverse/mudata · ★ 135 · Python · Prototype](https://repo.masters-masters.com/en/repos/scverse/mudata)
- [scverse/spatialdata-io · ★ 108 · Python · Prototype](https://repo.masters-masters.com/en/repos/scverse/spatialdata-io)

## See scverse on GitHub

- [https://github.com/scverse](https://github.com/scverse)

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Data: GitHub