# aertslab/pySCENIC

<https://repo.masters-masters.com/en/repos/aertslab/pySCENIC>

[Home](https://repo.masters-masters.com/en) › [aertslab](https://repo.masters-masters.com/en/owners/aertslab) › [pySCENIC](https://repo.masters-masters.com/en/repos/aertslab/pySCENIC)

aertslab/pySCENIC has 649 stars on GitHub. Its RepoMasters card: Alpha tier. pySCENIC is a lightning-fast python implementation of the SCENIC pipeline…

| Field | Value |
| --- | --- |
| Owner | [aertslab](https://repo.masters-masters.com/en/owners/aertslab) |
| Stars | 649 |
| Forks | 211 |
| Language | [Python](https://repo.masters-masters.com/en/languages/python) |
| License | GPL-3.0 |
| Created | 2018 |
| Topics | single-cell, transcriptomics, gene-regulatory-network, transcription-factors |
| Tier | [Alpha (250 to 699 ★)](https://repo.masters-masters.com/en/ranks/b_movie) |
| View on GitHub | [aertslab/pySCENIC](https://github.com/aertslab/pySCENIC) |

## Repository

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

The tier for repos with 250 to 699 ★. Published odds per card pulled: 20%. Rarity: Uncommon.

## More repos by aertslab

- [aertslab/SCENIC · ★ 501 · HTML · Alpha](https://repo.masters-masters.com/en/repos/aertslab/SCENIC)
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- [aertslab/SCENICprotocol · ★ 185 · Python · Prototype](https://repo.masters-masters.com/en/repos/aertslab/SCENICprotocol)
- [aertslab/cisTopic · ★ 150 · HTML · Prototype](https://repo.masters-masters.com/en/repos/aertslab/cisTopic)

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Data: GitHub · Illustration drawn by RepoMasters from the repo’s ID and its language color.