# cgroza/GraffiTE

<https://repo.masters-masters.com/en/repos/cgroza/GraffiTE>

[Home](https://repo.masters-masters.com/en) › [cgroza](https://repo.masters-masters.com/en/owners/cgroza) › [GraffiTE](https://repo.masters-masters.com/en/repos/cgroza/GraffiTE)

cgroza/GraffiTE has 278 stars on GitHub. Its RepoMasters card: Alpha tier. GraffiTE is a pipeline that finds polymorphic transposable elements in genome…

| Field | Value |
| --- | --- |
| Owner | [cgroza](https://repo.masters-masters.com/en/owners/cgroza) |
| Stars | 278 |
| Forks | 17 |
| Language | [Python](https://repo.masters-masters.com/en/languages/python) |
| License | None |
| Created | 2022 |
| Topics | bioinformatics, structural-variation, transposons |
| Tier | [Alpha (250 to 699 ★)](https://repo.masters-masters.com/en/ranks/b_movie) |
| View on GitHub | [cgroza/GraffiTE](https://github.com/cgroza/GraffiTE) |

## Repository

GraffiTE is a pipeline that finds polymorphic transposable elements in genome assemblies and/or long reads, and genotypes the discovered polymorphisms in read sets using genome-graphs.

The tier for repos with 250 to 699 ★. Published odds per card pulled: 20%. Rarity: Uncommon.

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Data: GitHub · Illustration drawn by RepoMasters from the repo’s ID and its language color.