# nf-core/scrnaseq

<https://repo.masters-masters.com/en/repos/nf-core/scrnaseq>

[Home](https://repo.masters-masters.com/en) › [nf-core](https://repo.masters-masters.com/en/owners/nf-core) › [scrnaseq](https://repo.masters-masters.com/en/repos/nf-core/scrnaseq)

nf-core/scrnaseq has 364 stars on GitHub. Its RepoMasters card: Alpha tier. Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or…

| Field | Value |
| --- | --- |
| Owner | [nf-core](https://repo.masters-masters.com/en/owners/nf-core) |
| Stars | 364 |
| Forks | 234 |
| Language | [Nextflow](https://repo.masters-masters.com/en/languages/nextflow) |
| License | MIT |
| Created | 2019 |
| Topics | nf-core, nextflow, workflow, pipeline, 10x-genomics, 10xgenomics, alevin, bustools, cellranger, kallisto |
| Tier | [Alpha (250 to 699 ★)](https://repo.masters-masters.com/en/ranks/b_movie) |
| View on GitHub | [nf-core/scrnaseq](https://github.com/nf-core/scrnaseq) |

## Repository

Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection

The tier for repos with 250 to 699 ★. Published odds per card pulled: 20%. Rarity: Uncommon.

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Data: GitHub · Illustration drawn by RepoMasters from the repo’s ID and its language color.