# refresh-bio/KMC

<https://repo.masters-masters.com/en/repos/refresh-bio/KMC>

[Home](https://repo.masters-masters.com/en) › [refresh-bio](https://repo.masters-masters.com/en/owners/refresh-bio) › [KMC](https://repo.masters-masters.com/en/repos/refresh-bio/KMC)

refresh-bio/KMC has 342 stars on GitHub. Its RepoMasters card: Alpha tier. Fast and frugal disk based k-mer counter: counts 55-mers in 36 gzipped FASTQ files…

| Field | Value |
| --- | --- |
| Owner | [refresh-bio](https://repo.masters-masters.com/en/owners/refresh-bio) |
| Stars | 342 |
| Forks | 86 |
| Language | [C++](https://repo.masters-masters.com/en/languages/c-plus-plus) |
| License | GPL-3.0 |
| Created | 2014 |
| Tier | [Alpha (250 to 699 ★)](https://repo.masters-masters.com/en/ranks/b_movie) |
| View on GitHub | [refresh-bio/KMC](https://github.com/refresh-bio/KMC) |

## Repository

Fast and frugal disk based k-mer counter: counts 55-mers in 36 gzipped FASTQ files totaling 614 GB (WGS paired-end reads of NA12878, Illumina HiSeq 2000) in under 1.5 h, using 12 threads, 32 GB of RAM, and 389 GB of temporary disk, on a workstation with 2 Intel Xeon E5-2670 v3 CPUs (12 cores each a…

The tier for repos with 250 to 699 ★. Published odds per card pulled: 20%. Rarity: Uncommon.

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Data: GitHub · Illustration drawn by RepoMasters from the repo’s ID and its language color.