Nextflow GitHub repos
41 Nextflow repos in the catalog, most starred first.
- nf-core/rnaseqStars: 1,403NextflowBeta
- nf-core/sarekStars: 616NextflowAlpha
- bactopia/bactopiaStars: 525NextflowAlpha
- nf-core/modulesStars: 434NextflowAlpha
- nextflow-io/patternsStars: 374NextflowAlpha
- nf-core/scrnaseqStars: 364NextflowAlpha
- BortonWrightonLabs/DRAMStars: 343NextflowAlpha
- nf-core/magStars: 326NextflowAlpha
- nextflow-io/trainingStars: 276NextflowAlpha
- nf-core/ampliseqStars: 265NextflowAlpha
- nf-core/chipseqStars: 245NextflowPrototype
- nf-core/atacseqStars: 233NextflowPrototype
- nf-core/nanoseqStars: 232NextflowPrototype
- ncbi/egapxStars: 214NextflowPrototype
- nf-core/eagerStars: 213NextflowPrototype
- nf-core/fetchngsStars: 202NextflowPrototype
- nf-core/methylseqStars: 201NextflowPrototype
- nf-core/taxprofilerStars: 193NextflowPrototype
- epi2me-labs/wf-human-variationStars: 181NextflowPrototype
- PGScatalog/pgsc_calcStars: 178NextflowPrototype
- nf-core/rnafusionStars: 176NextflowPrototype
- nf-core/viralreconStars: 166NextflowPrototype
- labsyspharm/mcmicroStars: 156NextflowPrototype
- CRG-CNAG/CalliNGS-NFStars: 137NextflowPrototype
- MaestSi/MetONTIIMEStars: 129NextflowPrototype
- nf-core/oncoanalyserStars: 128NextflowPrototype
- nf-core/rarediseaseStars: 126NextflowPrototype
- nf-core/funcscanStars: 119NextflowPrototype
- nf-core/scdownstreamStars: 119NextflowPrototype
- genomicsITER/NanoCLUSTStars: 117NextflowPrototype