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ratschlab/DeepSpot

DeepSpot: Deep learning model for predicting spatial transcriptomics from H&E histopathology images. Supports spot-level (Visium) and single-cell (Xenium) resolution.

Owner
ratschlab (organization)
Stars
Stars: 105
Forks
Forks: 21
Language
Jupyter Notebook
License
MIT
Created
2024
Topics
machine-learningspatial-transcriptomicspathologybioinformaticscancer-researchcomputational-pathologydeep-learningdigital-pathologyfoundation-modelsgene-expression
Tier
Prototype (100 to 249 ★) What this tier means
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