AlphaUncommon
refresh-bio/KMC
Fast and frugal disk based k-mer counter: counts 55-mers in 36 gzipped FASTQ files totaling 614 GB (WGS paired-end reads of NA12878, Illumina HiSeq 2000) in under 1.5 h, using 12 threads, 32 GB of RAM, and 389 GB of temporary disk, on a workstation with 2 Intel Xeon E5-2670 v3 CPUs (12 cores each a…
- Owner
- refresh-bio (organization)
- Stars
- Stars: 342
- Forks
- Forks: 86
- Language
- C++
- License
- GPL-3.0
- Created
- 2014
- Tier
- Alpha (250 to 699 ★) What this tier means
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